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Conformational Analysis and Physical-Chemistry Property Relationship for 22-Membered Macrolides
Corresponding Author(s) : Salah Belaidi
Asian Journal of Chemistry,
Vol. 25 No. 8 (2013): Vol 25 Issue 8
Abstract
Conformational analysis of 22 membered macrolactones has been carried out using molecular mechanics calculations and molecular dynamics. A high conformational flexibility of macrolactones was obtained and an important stereoselectivity was observed for the complexed macrolactones. For 22 d macrolactone, which was presented by a most favoured conformer with 20.1 % without complex; it was populated with 36.2 % in presence of Fe(CO)3. An additional study is performed of structure-property relationship for a series of 22-membered macrolides antibiotics.
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- Z.Q. Ye, T.Y. Gao and G. Zhao, Tetrahedron, 67, 5979 (2011).
- S. Ma, B. Jiao, Y.J. Ju, M.J. Zheng, R.X. Ma, L. Liu, L. Zhang, X.C. Shen, C.C. Ma, Y. Meng, H. Wang, Y.K. Qi, X.D. Ma and W.P. Cui, Eur. J. Med. Chem., 46, 556 (2011).
- B.C. Raimundo and C.H. Heathcock, Org. Lett., 2, 27 (2000).
- S. Omura, Macrolide Antibiotics Chemistry Biology and Practice, Academic press, New-york (1984).
- K. Gustafson, M. Roman and W. Fenical, J. Am. Chem. Soc., 111, 7519 (1989).
- T. Nagao, K. Adachi, M. Sakai, M. Nishijima and H. Sano, J. Antibiotics, 54, 333 (2001).
- C. Jaruchoktaweechai, K. Suwanborirux, S. Tanasupawatt, P. Kittakoop and P.J. Menasveta, J. Nat. Prod., 63, 984 (2000).
- H. Kim, W. Kim, I. Ryoo, C. Kim, J. Suk, K. Han, S. Hwang and I. Yoo, J. Microbiol. Biotechnol., 7, 434 (1997).
- S.W. Choi, D.H. Bai, J.H. Yu and C.S. Shin, Can. J. Microbiol., 49, 663 (2003).
- S. Carmely and Y. Kashman, Tetrahedron Lett., 26, 511 (1985).
- M. Ojika, T. Nagoya and K. Yamada, Tetrahedron Lett., 36, 7491 (1995).
- Y. Dong, J. Yang, H. Zhang, J. Lin, X. Ren, M. Liu, X. Lu and J. He, J. Nat. Prod., 69, 128 (2006).
- W.C. Still and I. Galynker, Tetrahedron, 37, 3981 (1981).
- D.M. Grée, C.J.M. Kermarrec, J.T. Martelli, R.L. Grée, J.P. Lellouche and L.J. Toupet, J. Org. Chem., 61, 1918 (1996).
- R. Grée and J.P. Lellouche, Adv. Metal-Org. Chem., 4, 1 (1993).
- S. Belaidi, M. Laabassi, R. Gree and A. Botrel, Sci. Study Res., 4, 27 (2003).
- S. Belaidi, M. Laabassi, R. Gree and A. Botrel, Rev. Roum. Chim., 50, 759 (2005).
- J. Koca, J. Mol. Struct., 291, 255 (1993).
- N.L. Allinger, Pure Appl. Chem., 54, 25l5 (1982).
- N.L. Allinger, J. Am. Chem. Soc., 99, 8127 (1977).
- 1 N. Metropolis, A.W. Rosenbluth, M.N. Rosenbluth, A.H. Teller and E. Teller, J. Chem. Phys., 21, 1087 (1953).
- HyperChem (Molecular Modeling System) Hypercube, Inc., 1115 NW, 4th Street, Gainesville, FL32601; USA (2006).
- C.S. Chem3D Pro, Molecular Modelling and Analysis, Cambridge Soft Corporation, 875 Massachusetts, 02139c USA (2005).
- S. Belaidi, M. Omari and A. Dibi, J. Soc. Algér. Chim., 10, 221 (2000).
- S. Belaidi, A. Dibi and M. Omari, Turk. J. Chem., 26, 491 (2002).
- S. Belaidi, M. Omari, T. Lanez and A. Dibi, J. Soc. Algér. Chim., 14, 27 (2004).
- S. Belaidi, T. Lanez, M. Omari and A. Botrel, Asian J. Chem., 17, 859 (2005).
- S. Belaidi and D. Harkati, ISRN Org. Chem., 2011, Article ID 594242 (2011).
- M. Saunders, K.N. Houk, Y.-D. Wu, W.C. Still, M. Lipton and G. Chang, J. Am. Chem. Soc., 112, 1419 (1990).
- T. Yamazaki, M. Ando, T. Kitazume, T. Kubota and M. Omura, Org. Lett., 1, 905 (1999).
- L.R. Cox and S.V. Ley, Chem. Soc. Rev., 27, 301 (1998).
- V.N. Viswanadhan,A.K. Ghose, G.R. Revankar and R.K. Robins, J. Chem. Informat. Comp. Sci., 29, 163 (1989).
- A.K. Ghose and G.M. Crippen, J. Chem. Informat. Comp. Sci., 27, 21 (1987).
- N. Bodor, Z. Gabanyi and C.K. Wong, J. Am. Chem. Soc., 111, 3783 (1989).
- A. Gavezzotti, J. Am. Chem. Soc., 105, 5220 (1983).
- K.J. Miller, J. Am. Chem. Soc., 112, 8533 (1990).
- T. Ooi, M. Oobatake, G. Nemethy and H.A. Scheraga, Proc. Nat. Acad. Sci. (USA), 84, 3086 (1987).
- E.H. Kerns and L. Di, Drug-like Properties: Concepts, Structure Design and Methods: from ADME to Toxicity Optimization, Elsevier Inc, pp. 43-47 (2008).
- B. Yavorski and A. Detlaf, Checklist of Physics, Editions Mir, Moscow, p. 376 (1980).
- TAMMO, 'Theoretical Analysis of Molecular Membrane Organization, CRC Press, Boca Raton, Florida, USA (1995).
- M. Deleu, Ph.D. Thesis, Synthesis of Surfactin Derivatives and Study their Properties,, FUSAGX, Belgium (2000).
- L.B. Kier, Molecular Orbital Theory in Drug Research,Academic Press, New York, NY, USA (1981).
References
Z.Q. Ye, T.Y. Gao and G. Zhao, Tetrahedron, 67, 5979 (2011).
S. Ma, B. Jiao, Y.J. Ju, M.J. Zheng, R.X. Ma, L. Liu, L. Zhang, X.C. Shen, C.C. Ma, Y. Meng, H. Wang, Y.K. Qi, X.D. Ma and W.P. Cui, Eur. J. Med. Chem., 46, 556 (2011).
B.C. Raimundo and C.H. Heathcock, Org. Lett., 2, 27 (2000).
S. Omura, Macrolide Antibiotics Chemistry Biology and Practice, Academic press, New-york (1984).
K. Gustafson, M. Roman and W. Fenical, J. Am. Chem. Soc., 111, 7519 (1989).
T. Nagao, K. Adachi, M. Sakai, M. Nishijima and H. Sano, J. Antibiotics, 54, 333 (2001).
C. Jaruchoktaweechai, K. Suwanborirux, S. Tanasupawatt, P. Kittakoop and P.J. Menasveta, J. Nat. Prod., 63, 984 (2000).
H. Kim, W. Kim, I. Ryoo, C. Kim, J. Suk, K. Han, S. Hwang and I. Yoo, J. Microbiol. Biotechnol., 7, 434 (1997).
S.W. Choi, D.H. Bai, J.H. Yu and C.S. Shin, Can. J. Microbiol., 49, 663 (2003).
S. Carmely and Y. Kashman, Tetrahedron Lett., 26, 511 (1985).
M. Ojika, T. Nagoya and K. Yamada, Tetrahedron Lett., 36, 7491 (1995).
Y. Dong, J. Yang, H. Zhang, J. Lin, X. Ren, M. Liu, X. Lu and J. He, J. Nat. Prod., 69, 128 (2006).
W.C. Still and I. Galynker, Tetrahedron, 37, 3981 (1981).
D.M. Grée, C.J.M. Kermarrec, J.T. Martelli, R.L. Grée, J.P. Lellouche and L.J. Toupet, J. Org. Chem., 61, 1918 (1996).
R. Grée and J.P. Lellouche, Adv. Metal-Org. Chem., 4, 1 (1993).
S. Belaidi, M. Laabassi, R. Gree and A. Botrel, Sci. Study Res., 4, 27 (2003).
S. Belaidi, M. Laabassi, R. Gree and A. Botrel, Rev. Roum. Chim., 50, 759 (2005).
J. Koca, J. Mol. Struct., 291, 255 (1993).
N.L. Allinger, Pure Appl. Chem., 54, 25l5 (1982).
N.L. Allinger, J. Am. Chem. Soc., 99, 8127 (1977).
1 N. Metropolis, A.W. Rosenbluth, M.N. Rosenbluth, A.H. Teller and E. Teller, J. Chem. Phys., 21, 1087 (1953).
HyperChem (Molecular Modeling System) Hypercube, Inc., 1115 NW, 4th Street, Gainesville, FL32601; USA (2006).
C.S. Chem3D Pro, Molecular Modelling and Analysis, Cambridge Soft Corporation, 875 Massachusetts, 02139c USA (2005).
S. Belaidi, M. Omari and A. Dibi, J. Soc. Algér. Chim., 10, 221 (2000).
S. Belaidi, A. Dibi and M. Omari, Turk. J. Chem., 26, 491 (2002).
S. Belaidi, M. Omari, T. Lanez and A. Dibi, J. Soc. Algér. Chim., 14, 27 (2004).
S. Belaidi, T. Lanez, M. Omari and A. Botrel, Asian J. Chem., 17, 859 (2005).
S. Belaidi and D. Harkati, ISRN Org. Chem., 2011, Article ID 594242 (2011).
M. Saunders, K.N. Houk, Y.-D. Wu, W.C. Still, M. Lipton and G. Chang, J. Am. Chem. Soc., 112, 1419 (1990).
T. Yamazaki, M. Ando, T. Kitazume, T. Kubota and M. Omura, Org. Lett., 1, 905 (1999).
L.R. Cox and S.V. Ley, Chem. Soc. Rev., 27, 301 (1998).
V.N. Viswanadhan,A.K. Ghose, G.R. Revankar and R.K. Robins, J. Chem. Informat. Comp. Sci., 29, 163 (1989).
A.K. Ghose and G.M. Crippen, J. Chem. Informat. Comp. Sci., 27, 21 (1987).
N. Bodor, Z. Gabanyi and C.K. Wong, J. Am. Chem. Soc., 111, 3783 (1989).
A. Gavezzotti, J. Am. Chem. Soc., 105, 5220 (1983).
K.J. Miller, J. Am. Chem. Soc., 112, 8533 (1990).
T. Ooi, M. Oobatake, G. Nemethy and H.A. Scheraga, Proc. Nat. Acad. Sci. (USA), 84, 3086 (1987).
E.H. Kerns and L. Di, Drug-like Properties: Concepts, Structure Design and Methods: from ADME to Toxicity Optimization, Elsevier Inc, pp. 43-47 (2008).
B. Yavorski and A. Detlaf, Checklist of Physics, Editions Mir, Moscow, p. 376 (1980).
TAMMO, 'Theoretical Analysis of Molecular Membrane Organization, CRC Press, Boca Raton, Florida, USA (1995).
M. Deleu, Ph.D. Thesis, Synthesis of Surfactin Derivatives and Study their Properties,, FUSAGX, Belgium (2000).
L.B. Kier, Molecular Orbital Theory in Drug Research,Academic Press, New York, NY, USA (1981).