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Molecular Docking Studies and in silico ADMET Screening of Indazole Scaffolds as VEGFR and Enoyl-ACP (CoA) Reductase Inhibitors
Corresponding Author(s) : Anuruddha R. Chabukswar
Asian Journal of Chemistry,
Vol. 34 No. 9 (2022): Vol 34 Issue 9
Abstract
Lung cancer is expected to account for 11.4 % of the cancer burden in 2020, with an estimated 2.2 million new cases diagnosed and 1.8 million deaths occurring. Non-small-cell lung cancer accounted for approximately 85% of newly diagnosed lung cancer cases. In non-small cell lung cancer and tuberculosis level of vascular endothelial growth factor was found to be elevated, which induces angiogenesis. In this study molecular docking analysis along with pharmacokinetic/ADMET and drug likeness prediction were carried out to evaluate the newly designed indazole scaffolds as potent VEGFR and Enoyl-ACP (CoA) reductase enzyme inhibitors. Out of 11 screened compounds, two compounds having good scores (-7.72 and -7.54 kcal/mol) emerged as effective and potent VEGFR-2 inhibitors and three compounds showed highest binding affinities (-8.30, -7.76, -7.62 kcal/mol) with Enoyl-ACP. This study reveals that, newly designed indazole compounds could be the potential drug of choice against non-small cell lung cancer and tuberculosis.
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- H. Sung, J. Ferlay, R.L. Siegel, M. Laversanne, I. Soerjomataram, A. Jemal and F. Bray, CA Cancer J. Clin., 71, 209 (2021); https://doi.org/10.3322/caac.21660
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- P. Wu, T.E. Nielsen and M.H. Clausen, Trends Pharmacol. Sci., 36, 422 (2015); https://doi.org/10.1016/j.tips.2015.04.005
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- N.M.Y. Elsayed, R.A.T. Serya, M.F. Tolba, M. Ahmed, K. Barakat, D.A. Abou El Ella and K.A.M. Abouzid, Bioorg. Chem., 82, 340 (2019); https://doi.org/10.1016/j.bioorg.2018.10.071
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- P. Ertl and A. Schuffenhauer, J. Cheminform., 1, 8 (2009); https://doi.org/10.1186/1758-2946-1-8
- M.T. Ibrahim, A. Uzairu, S. Uba and G.A. Shallangwa, Future J. Pharm. Sci., 6, 55 (2020); https://doi.org/10.1186/s43094-020-00074-6
- P. Ertl, B. Rohde and P. Selzer, J. Med. Chem., 43, 3714 (2000); https://doi.org/10.1021/jm000942e
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References
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Y.Y. Ching, C.H.Y. James and Y.P. Chyr, Annu. Rev. Med., 71, 117 (2020); https://doi.org/10.1146/annurev-med-051718-013524
D.J. Hicklin and L.M. Ellis, J. Clin. Oncol., 23, 1011 (2005); https://doi.org/10.1200/JCO.2005.06.081
R.D. Hall, T.M. Le, D.E. Haggstrom and R.D. Gentzler, Transl. Lung Cancer Res., 4, 515 (2015); https://doi.org/10.3978/j.issn.2218-6751.2015.06.09
R. Roskoski Jr., Biochem. Biophys. Res. Commun., 375, 287 (2008); https://doi.org/10.1016/j.bbrc.2008.07.121
J. Subramanian, D. Morgensztern and R. Govindan, Clin. Lung Cancer, 11, 311 (2010); https://doi.org/10.3816/CLC.2010.n.039
J. Zhang, P.L. Yang and N.S. Gray, Nat. Rev. Cancer, 9, 28 (2009); https://doi.org/10.1038/nrc2559
P. Wu, T.E. Nielsen and M.H. Clausen, Trends Pharmacol. Sci., 36, 422 (2015); https://doi.org/10.1016/j.tips.2015.04.005
H. Polena, F. Boudou, S. Tilleul, N. Dubois-Colas, C. Lecointe, P. Charles, N. Rakotosamimanana, M. Pelizzola, V. Raharimanga, J.-L. Herrmann, S.F. Andriamandimby, P. Ricciardi-Castagnoli, V. Rasolofo, B. Gicquel and L. Tailleux, Sci. Rep., 6, 33162 (2016); https://doi.org/10.1038/srep33162
A. Spagnuolo, G. Palazzolo, C. Sementa and C. Gridelli, Expert Opin. Pharmacother., 21, 491 (2020); https://doi.org/10.1080/14656566.2020.1713092
https://apps.who.int/iris/bitstream/handle/10665/336069/ 9789240013131eng.pdf
N.M.Y. Elsayed, R.A.T. Serya, M.F. Tolba, M. Ahmed, K. Barakat, D.A. Abou El Ella and K.A.M. Abouzid, Bioorg. Chem., 82, 340 (2019); https://doi.org/10.1016/j.bioorg.2018.10.071
N. Tandon, V. Luxami, D. Kant, R. Tandon and K. Paul, RSC Adv., 11, 25228 (2021); https://doi.org/10.1039/D1RA03979B
V.T. Angelova, T. Pencheva, N. Vassilev, R. Simeonova, G. Momekov and V. Valcheva, Med. Chem. Res., 28, 485 (2019); https://doi.org/10.1007/s00044-019-02293-w
M. Datta, L.E. Via, W.S. Kamoun, C. Liu, W. Chen, G. Seano, D.M. Weiner, D. Schimel, K. England, J.D. Martin, X. Gao, L. Xu, C.E. Barry 3rd and R.K. Jain, Proc. Natl. Acad. Sci. USA, 112, 1827 (2015); https://doi.org/10.1073/pnas.1424563112
N.M. O’Boyle, M. Banck, C.A. James, C. Morley, T. Vandermeersch and G.R. Hutchison, J. Cheminform., 3, 33 (2011); https://doi.org/10.1186/1758-2946-3-33
E.F. Pettersen, T.D. Goddard, C.C. Huang, G.S. Couch, D.M. Greenblatt, E.C. Meng and T.E. Ferrin, J. Comput. Chem., 25, 1605 (2004); https://doi.org/10.1002/jcc.20084
S. Forli, R. Huey, M.E. Pique, M.F. Sanner, D.S. Goodsell and A.J. Olson, Nat. Protoc., 11, 905 (2016); https://doi.org/10.1038/nprot.2016.051
L.G. Ferreira, R.S. Dos Santos, G. Oliva and A.D. Andricopulo, Molecules, 20, 13384 (2015); https://doi.org/10.3390/molecules200713384
M. McTigue, B.W. Murray, J.H. Chen, Y.-L. Deng, J. Solowiej and R.S. Kania, Proc. Natl. Acad. Sci. USA, 109, 18281 (2012); https://doi.org/10.1073/pnas.1207759109
J.S. Oliveira, J.H. Pereira, F. Canduri, N.C. Rodrigues, O.N. de Souza, W.F. de Azevedo, L.A. Basso and D.S. Santos, J. Mol. Biol., 359, 646 (2006); https://doi.org/10.1016/j.jmb.2006.03.055
C.A. Lipinski, F. Lombardo, B.W. Dominy and P.J. Feeney, Adv. Drug Deliv. Rev., 46, 3 (2001); https://doi.org/10.1016/S0169-409X(00)00129-0
A. Daina, O. Michielin and V. Zoete, Sci. Rep., 7, 42717 (2017); https://doi.org/10.1038/srep42717
P. Ertl and A. Schuffenhauer, J. Cheminform., 1, 8 (2009); https://doi.org/10.1186/1758-2946-1-8
M.T. Ibrahim, A. Uzairu, S. Uba and G.A. Shallangwa, Future J. Pharm. Sci., 6, 55 (2020); https://doi.org/10.1186/s43094-020-00074-6
P. Ertl, B. Rohde and P. Selzer, J. Med. Chem., 43, 3714 (2000); https://doi.org/10.1021/jm000942e
A.R. Chabukswar, B.S. Kuchekar, P.D. Lokhande, M. Tryambake, B. Pagare, V. Kadam, S. Jagdale and V. Chabukswar, Curr. Bioact. Compd., 9, 263 (2013); https://doi.org/10.2174/1573407209999131231095550