Copyright (c) 2022 AJC
This work is licensed under a Creative Commons Attribution 4.0 International License.
In silico, ADMET and Docking Analysis for the Compounds of Chloroform Extract of Tinospora cardifolia (Wild.) Identified by GC-MS and Spectral Analysis for Antidiabetic and Anti-Inflammatory Activity
Corresponding Author(s) : Biswabara Roy
Asian Journal of Chemistry,
Vol. 34 No. 2 (2022): Vol 34 Issue 2
Abstract
The present study was aimed to phytochemical and GC-MS analysis for chloroform extract of Tinospora cardifolia. The structure of the compounds was further confirmed by UV-spectroscopy and FTIR study. The in silico study like molecular, physico-chemical and drug likeliness property was carried out by computational approaches for the identified molecules. Further toxicity potential and pharmacokinetic profile were also determined. The study was carried out using OSIRIS data warrior and Swiss ADME tools. The docking analysis was carried out for the antidiabetic and anti-inflammatory profiles. The compounds were targeted for α-glucosidase, peroxisome proliferator-activated receptor, glucose transporter-1, cyclo-oxygenase-1 & 2 inhibitions. There were around 12 compounds identified by GC-MS analysis. All the compounds exhibited moderate to good drug likeliness and pharmacokinetic potentials. The molecules showed a good bioactivity score against enzyme receptors. The ADMET prediction showed PGP and CYP-inhibitory effects with the least toxic profile. The docking analysis showed strong binding affinity of [1S-(1α,3aα,4α,6aα)]-1H,3H-furo[3,4-c]furan tetrahydrophenyl (molecule-7) on targeted proteins under investigation.
Keywords
Download Citation
Endnote/Zotero/Mendeley (RIS)BibTeX
- A.S. Olabiyi, F.E. Nkemehule, O.A. Odukoya, T.A. Samuel and S.O. Ogbonnia, Biochem. Pharmacol., 2, 181 (2013).
- M. Ekor, Front. Pharmacol., 4, 177 (2013); https://doi.org/10.3389/fphar.2013.00177
- R. Wilken, M.S. Veena, M.B. Wang and E.S. Srivatsan, Mol. Cancer, 10, 12 (2011); https://doi.org/10.1186/1476-4598-10-12
- P. Pinal, P. Dharmik and P. Natvarlal, Chin. J. Nat. Med., 10, 269 (2012); https://doi.org/10.3724/SP.J.1009.2012.00269
- D. Singh and P.K. Chaudhuri, Nat. Prod. Commun., 12, 299 (2017).
- S. Saha and S. Ghosh, Anc. Sci. Life, 31, 151 (2012); https://doi.org/10.4103/0257-7941.107344
- P. Sharma, B.P.Dwivedee, D. Bisht, A.K. Dash and D. Kumar, Heliyon, 5, e02437 (2019); https://doi.org/10.1016/j.heliyon.2019.e02437
- Y.R. Chadha, The Wealth of India, Publication and Information Directorate, CSIR, New Delhi, pp. 251 (1976).
- N.N. Rege, U.M. Thatte and S.A. Dahanukar, Phytother. Res., 13, 275 (1999); https://doi.org/10.1002/(SICI)1099-1573(199906)13:4<275::AID-PTR510>3.0.CO;2-S
- A.K. Upadhyay, K. Kumar, A. Kumar and H.S. Mishra, Int. J. Ayurveda Res., 1, 112 (2010); https://doi.org/10.4103/0974-7788.64405
- S. Ghosal and R.A. Vishwakarma, J. Nat. Prod., 60, 839 (1997); https://doi.org/10.1021/np970169z
- P.A. Bafna and R. Balaraman, Phytomedicine, 12, 264 (2005); https://doi.org/10.1016/j.phymed.2003.12.009
- C.K. Atal, M.L. Sharma, A. Kaul and A. Khajuria, J. Ethnopharmacol., 18, 133 (1986); https://doi.org/10.1016/0378-8741(86)90025-5
- S. Vedavathy and K.N. Rao, J. Ethnopharmacol., 33, 193 (1991); https://doi.org/10.1016/0378 8741(91)90178-G
- G.C. Jagetia and S.K. Rao, Evid. Based Complement Alternat. Med., 3, 267 (2006); https://doi.org/10.1093/ecam/nel011
- G.C. Jagetia and S.K. Rao, Biol. Pharm. Bull., 29, 460 (2006); https://doi.org/10.1248/bpb.29.460
- S.S. Gupta, S.C.L. Verma, V.P. Garg and R. Mahesh, Indian J. Med. Res., 55, 733 (1967).
- N. Wadood, A. Wadood and S. Shah, Planta Med., 58, 131 (1992); https://doi.org/10.1055/s-2006 961414
- V. Sharma, R. Gupta and S. Shatruhan, Int. J. Res. Pharm. Sci., 2, 585 (2011).
- V. Sharma, S. Sharma and R. Gupta, J. Nat. Pharm., 2, 125 (2011); https://doi.org/10.4103/2229 5119.86258
- P. Stanely Mainzen Prince and V.P. Menon, J. Ethnopharmacol., 65, 277 (1999); https://doi.org/10.1016/S0378-8741(98)00164-0
- P.S.M. Prince, V.P. Menon and G. Gunasekaran, J. Ethnopharmacol., 64, 53 (1998); https://doi.org/10.1016/S0378-8741(98)00106-8
- P. Stanely, M. Prince and V.P. Menon, J. Ethnopharmacol., 70, 9 (2000); https://doi.org/10.1016/S0378 8741(99)00136-1
- D. Jain, R.K. Dhuria, T. Sharma and T. Bothra, Int. J. Chem. Stud., 6, 2336 (2018).
- S. Thillaivanan and K. Samraj, Int. J. Herb. Med., 2, 21 (2014).
- G.I. Makrynitsa, M. Lykouras, G.A. Spyroulias and M.-T. Matsoukas, In silico Drug Design, John Wiley & Sons, Ltd: Chichester (2018).
- A. Dhanik and L.E. Kavraki, Protein–Ligand Interactions: Computational Docking, John Wiley & Sons, Ltd., vol. 1 (2006).
- D. Stumpfe and J. Bajorath, WIREs Comput. Mol. Sci., 1, 260 (2011); https://doi.org/10.1002/wcms.23
- G.R. Marshall, C.D. Barry, H.E. Bosshard, R.A. Dammkoehler and D.A. Dunn, Computer-Assisted Drug Des., 112, 205 (1979); https://doi.org/10.1021/bk-1979-0112.ch009
- B.J. McConkey, V. Sobolev and M. Edelman, Curr. Sci., 83, 845 (2002).
- X.Y. Meng, H.X. Zhang, M. Mezei and M. Cui, Curr. Computeraided Drug Des., 7, 146 (2011); https://doi.org/10.2174/157340911795677602
- A. Kumar, A. Voet and K. Zhang, Curr. Med. Chem., 19, 5128 (2012); https://doi.org/10.2174/092986712803530467
- N. Chaudhary, M.B. Siddiqui and S. Khatoon, J. Res. Indian Med., 13, 543 (2014).
- C.K. Kokate, Pharmacognosy, Nirali Prakashan: Pune, India, Ed.: 17, p. 106 (2001).
- A. Nicholls, G.B. McGaughey, R.P. Sheridan, A.C. Good, G. Warren, M. Mathieu, S.W. Muchmore, S.P. Brown, J.A. Grant, J.A. Haigh, N. Nevins, A.N. Jain and B. Kelley, J. Med. Chem., 53, 3862 (2010); https://doi.org/10.1021/jm900818s
- R. Rohs, I. Bloch, H. Sklenar and Z. Shakked, Nucleic Acids Res., 33, 7048 (2005); https://doi.org/10.1093/nar/gki1008
- O. Méndez-Lucio and J.L. Medina-Franco, Drug Discov. Today, 22, 120 (2017); https://doi.org/10.1016/j.drudis.2016.08.009
- L.Z. Benet, C.M. Hosey, O. Ursu and T.I. Oprea, Adv. Drug Deliv. Rev., 101, 89 (2016); https://doi.org/10.1016/j.addr.2016.05.007
- S. Prasanna and R.J. Doerksen, Curr. Med. Chem., 16, 21 (2009); https://doi.org/10.2174/092986709787002817
- D. Ji, M. Xu, C.C. Udenigwe and D. Agyei, Curr. Res. Food Sci., 3, 41 (2020); https://doi.org/10.1016/j.crfs.2020.03.001
- A. Husain, A. Ahmad, S.A. Khan, M. Asif, R. Bhutani and F.A. AlAbbasi, Saudi Pharm. J., 24, 104 (2016); https://doi.org/10.1016/j.jsps.2015.02.008
- W.S. Nimmo, Clin. Pharmacokinet., 1, 189 (1976); https://doi.org/10.2165/00003088-197601030 00002
- M.D. Wessel, P.C. Jurs, J.W. Tolan and S.M. Muskal, J. Chem. Inf. Comput. Sci., 38, 726 (1998); https://doi.org/10.1021/ci980029a
- W.M. Pardridge, J. Cereb. Blood Flow Metab., 32, 1959 (2012); https://doi.org/10.1038/jcbfm.2012.126
- Y. Tanigawara, Ther. Drug Monit., 22, 137 (2000); https://doi.org/10.1097/00007691-200002000-00029
- J.H. Lin and A.Y. Lu, Clin. Pharmacokinet., 35, 361 (1998); https://doi.org/10.2165/00003088 199835050-00003
- R.O. Potts and R.H. Guy, Pharm. Res., 9, 663 (1992); https://doi.org/10.1023/A:1015810312465
- G.M. Morris and M. Lim-WilbyA. Kukol, Methods Mol. Biol., 443, 365 (2008); https://doi.org/10.1007/978-1-59745-177-2_19
References
A.S. Olabiyi, F.E. Nkemehule, O.A. Odukoya, T.A. Samuel and S.O. Ogbonnia, Biochem. Pharmacol., 2, 181 (2013).
M. Ekor, Front. Pharmacol., 4, 177 (2013); https://doi.org/10.3389/fphar.2013.00177
R. Wilken, M.S. Veena, M.B. Wang and E.S. Srivatsan, Mol. Cancer, 10, 12 (2011); https://doi.org/10.1186/1476-4598-10-12
P. Pinal, P. Dharmik and P. Natvarlal, Chin. J. Nat. Med., 10, 269 (2012); https://doi.org/10.3724/SP.J.1009.2012.00269
D. Singh and P.K. Chaudhuri, Nat. Prod. Commun., 12, 299 (2017).
S. Saha and S. Ghosh, Anc. Sci. Life, 31, 151 (2012); https://doi.org/10.4103/0257-7941.107344
P. Sharma, B.P.Dwivedee, D. Bisht, A.K. Dash and D. Kumar, Heliyon, 5, e02437 (2019); https://doi.org/10.1016/j.heliyon.2019.e02437
Y.R. Chadha, The Wealth of India, Publication and Information Directorate, CSIR, New Delhi, pp. 251 (1976).
N.N. Rege, U.M. Thatte and S.A. Dahanukar, Phytother. Res., 13, 275 (1999); https://doi.org/10.1002/(SICI)1099-1573(199906)13:4<275::AID-PTR510>3.0.CO;2-S
A.K. Upadhyay, K. Kumar, A. Kumar and H.S. Mishra, Int. J. Ayurveda Res., 1, 112 (2010); https://doi.org/10.4103/0974-7788.64405
S. Ghosal and R.A. Vishwakarma, J. Nat. Prod., 60, 839 (1997); https://doi.org/10.1021/np970169z
P.A. Bafna and R. Balaraman, Phytomedicine, 12, 264 (2005); https://doi.org/10.1016/j.phymed.2003.12.009
C.K. Atal, M.L. Sharma, A. Kaul and A. Khajuria, J. Ethnopharmacol., 18, 133 (1986); https://doi.org/10.1016/0378-8741(86)90025-5
S. Vedavathy and K.N. Rao, J. Ethnopharmacol., 33, 193 (1991); https://doi.org/10.1016/0378 8741(91)90178-G
G.C. Jagetia and S.K. Rao, Evid. Based Complement Alternat. Med., 3, 267 (2006); https://doi.org/10.1093/ecam/nel011
G.C. Jagetia and S.K. Rao, Biol. Pharm. Bull., 29, 460 (2006); https://doi.org/10.1248/bpb.29.460
S.S. Gupta, S.C.L. Verma, V.P. Garg and R. Mahesh, Indian J. Med. Res., 55, 733 (1967).
N. Wadood, A. Wadood and S. Shah, Planta Med., 58, 131 (1992); https://doi.org/10.1055/s-2006 961414
V. Sharma, R. Gupta and S. Shatruhan, Int. J. Res. Pharm. Sci., 2, 585 (2011).
V. Sharma, S. Sharma and R. Gupta, J. Nat. Pharm., 2, 125 (2011); https://doi.org/10.4103/2229 5119.86258
P. Stanely Mainzen Prince and V.P. Menon, J. Ethnopharmacol., 65, 277 (1999); https://doi.org/10.1016/S0378-8741(98)00164-0
P.S.M. Prince, V.P. Menon and G. Gunasekaran, J. Ethnopharmacol., 64, 53 (1998); https://doi.org/10.1016/S0378-8741(98)00106-8
P. Stanely, M. Prince and V.P. Menon, J. Ethnopharmacol., 70, 9 (2000); https://doi.org/10.1016/S0378 8741(99)00136-1
D. Jain, R.K. Dhuria, T. Sharma and T. Bothra, Int. J. Chem. Stud., 6, 2336 (2018).
S. Thillaivanan and K. Samraj, Int. J. Herb. Med., 2, 21 (2014).
G.I. Makrynitsa, M. Lykouras, G.A. Spyroulias and M.-T. Matsoukas, In silico Drug Design, John Wiley & Sons, Ltd: Chichester (2018).
A. Dhanik and L.E. Kavraki, Protein–Ligand Interactions: Computational Docking, John Wiley & Sons, Ltd., vol. 1 (2006).
D. Stumpfe and J. Bajorath, WIREs Comput. Mol. Sci., 1, 260 (2011); https://doi.org/10.1002/wcms.23
G.R. Marshall, C.D. Barry, H.E. Bosshard, R.A. Dammkoehler and D.A. Dunn, Computer-Assisted Drug Des., 112, 205 (1979); https://doi.org/10.1021/bk-1979-0112.ch009
B.J. McConkey, V. Sobolev and M. Edelman, Curr. Sci., 83, 845 (2002).
X.Y. Meng, H.X. Zhang, M. Mezei and M. Cui, Curr. Computeraided Drug Des., 7, 146 (2011); https://doi.org/10.2174/157340911795677602
A. Kumar, A. Voet and K. Zhang, Curr. Med. Chem., 19, 5128 (2012); https://doi.org/10.2174/092986712803530467
N. Chaudhary, M.B. Siddiqui and S. Khatoon, J. Res. Indian Med., 13, 543 (2014).
C.K. Kokate, Pharmacognosy, Nirali Prakashan: Pune, India, Ed.: 17, p. 106 (2001).
A. Nicholls, G.B. McGaughey, R.P. Sheridan, A.C. Good, G. Warren, M. Mathieu, S.W. Muchmore, S.P. Brown, J.A. Grant, J.A. Haigh, N. Nevins, A.N. Jain and B. Kelley, J. Med. Chem., 53, 3862 (2010); https://doi.org/10.1021/jm900818s
R. Rohs, I. Bloch, H. Sklenar and Z. Shakked, Nucleic Acids Res., 33, 7048 (2005); https://doi.org/10.1093/nar/gki1008
O. Méndez-Lucio and J.L. Medina-Franco, Drug Discov. Today, 22, 120 (2017); https://doi.org/10.1016/j.drudis.2016.08.009
L.Z. Benet, C.M. Hosey, O. Ursu and T.I. Oprea, Adv. Drug Deliv. Rev., 101, 89 (2016); https://doi.org/10.1016/j.addr.2016.05.007
S. Prasanna and R.J. Doerksen, Curr. Med. Chem., 16, 21 (2009); https://doi.org/10.2174/092986709787002817
D. Ji, M. Xu, C.C. Udenigwe and D. Agyei, Curr. Res. Food Sci., 3, 41 (2020); https://doi.org/10.1016/j.crfs.2020.03.001
A. Husain, A. Ahmad, S.A. Khan, M. Asif, R. Bhutani and F.A. AlAbbasi, Saudi Pharm. J., 24, 104 (2016); https://doi.org/10.1016/j.jsps.2015.02.008
W.S. Nimmo, Clin. Pharmacokinet., 1, 189 (1976); https://doi.org/10.2165/00003088-197601030 00002
M.D. Wessel, P.C. Jurs, J.W. Tolan and S.M. Muskal, J. Chem. Inf. Comput. Sci., 38, 726 (1998); https://doi.org/10.1021/ci980029a
W.M. Pardridge, J. Cereb. Blood Flow Metab., 32, 1959 (2012); https://doi.org/10.1038/jcbfm.2012.126
Y. Tanigawara, Ther. Drug Monit., 22, 137 (2000); https://doi.org/10.1097/00007691-200002000-00029
J.H. Lin and A.Y. Lu, Clin. Pharmacokinet., 35, 361 (1998); https://doi.org/10.2165/00003088 199835050-00003
R.O. Potts and R.H. Guy, Pharm. Res., 9, 663 (1992); https://doi.org/10.1023/A:1015810312465
G.M. Morris and M. Lim-WilbyA. Kukol, Methods Mol. Biol., 443, 365 (2008); https://doi.org/10.1007/978-1-59745-177-2_19