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Synthesis, Spectroscopic Properties and Hirshfeld Surface Analysis of 3,14-Dimethyl-2,6,13,17-tetraazoniatricyclo(16.4.0.07,12)docosane Tetrachloride Tetrahydrate
Corresponding Author(s) : Keon Sang Ryoo
Asian Journal of Chemistry,
Vol. 33 No. 8 (2021): Vol 33 Issue 8, 2021
Abstract
Single crystals of 3,14-dimethyl-2,6,13,17-tetraazoniatricyclo(16.4.0.07,12)docosane tetrachloride tetrahydrate compound, [C20H44N4]Cl4·4H2O (1), were obtained by a novel synthetic route and characterized by elemental analysis and X-ray diffraction. The synthesized compound crystallized in the monoclinic space group P21/n with two molecules of compound 1 in the unit cell [a = 7.5548(3) Å, b = 23.1838(8) Å, c = 8.3101(4) Å; β = 103.390(3)º]. The asymmetric unit contains half a centrosymmetric macrocyclic cation, two chloride anions and two water molecules. The organic [C20H44N4]4+ fragment of 1 adopts an exodentate [3,4,3,4]-D conformation. The C–C and N–C bond lengths of the macrocyclic tetracation range 1.525(3)-1.540(3) Å and 1.505(3)-1.519(3) Å, respectively. A three-dimensional hydrogen bonding network provides crystal cohesion through O–H···Cl, N–H···Cl and N–H···O interactions between organic cations, chloride anions and water molecules. The functional groups present in the crystal were studied by Fourier-transform infrared spectroscopy and Raman spectroscopy. The Hirshfeld surface analysis and 2D fingerprint plots revealed that the crystal packing in 1 is dominated by H···H, Cl···H/H···Cl and O···H/H···O contacts.
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- G.C. Valks, G. McRobbie, E.A. Lewis, T.J. Hubin, T.M. Hunter, P.J. Sadler, C. Pannecouque, E. De Clercq and S.J. Archibald, J. Med. Chem., 49, 6162 (2006); https://doi.org/10.1021/jm0607810
- L. Ronconi and P.J. Sadler, Coord. Chem. Rev., 251, 1633 (2007); https://doi.org/10.1016/j.ccr.2006.11.017
- A. Ross, J.-H. Choi, T.M. Hunter, C. Pannecouque, S.A. Moggach, S. Parsons, E. De Clercq and P.J. Sadler, Dalton Trans., 41, 6408 (2012); https://doi.org/10.1039/c2dt30140g
- E. De Clercq, J. Med. Chem., 53, 1438 (2010); https://doi.org/10.1021/jm900932g
- J.-H. Choi, M.A. Subhan, K.S. Ryoo and S.W. Ng, Acta Crystallogr. Sect. E, 68, o102 (2012); https://doi.org/10.1107/S160053681105272X
- D. Moon, S. Jeon, K.S. Ryoo and J.-H. Choi, Asian J. Chem., 32, 697 (2020); https://doi.org/10.14233/ajchem.2020.22506
- F. White, P.J. Sadler and M. Melchart, CSD Communication CCDC 1408165 (2015).
- J. Kim, S. Han, I.-K. Cho, K.Y. Choi, M. Heu, S. Yoon and B.J. Suh, Polyhedron, 23, 1333 (2004); https://doi.org/10.1016/j.poly.2004.02.026
- D. Moon, S. Jeon and J.-H. Choi, J. Mol. Struct., 1232, 130011 (2021); https://doi.org/10.1016/j.molstruc.2021.130011
- D. Moon and J.-H. Choi, Acta Crystallogr. Sect E, 74, 1039 (2018); https://doi.org/10.1107/S2056989018009337
- S.G. Kang, J.K. Kweon and S.K. Jung, Bull. Korean Chem. Soc., 12, 483 (1991).
- S. Jeon, J. Moncol, M. Mazúr, M. Valko and J.-H. Choi, Crystals, 9, 336 (2019); https://doi.org/10.3390/cryst9070336
- G.M. Sheldrick, Acta Crystallogr. Sect. A, 71, 3 (2015); https://doi.org/10.1107/S2053273314026370
- G.M. Sheldrick, Acta Crystallogr. Sect. C, 71, 3 (2015); https://doi.org/10.1107/S2053229614024218
- J. Koziskova, F. Hahn, J. Richter and J. Kozisek, Acta Chim. Slov., 9, 136 (2016); https://doi.org/10.1515/acs-2016-0023
- K. Brandenburg and H. Putz, DIAMOND-3, University of Bonn, Bonn, Germany (2014).
- J.-H. Choi, W. Clegg, G.S. Nichol, S.H. Lee, Y.C. Park and M.H. Habibi, Spectrochim. Acta A Mol. Biomol. Spectrosc., 68, 796 (2007); https://doi.org/10.1016/j.saa.2007.01.002
- J.-H. Choi and S.H. Lee, J. Mol. Struct., 932, 84 (2009); https://doi.org/10.1016/j.molstruc.2009.05.048
- D. Moon and J.-H. Choi, Spectrochim. Acta A Mol. Biomol. Spectrosc., 138, 774 (2015); https://doi.org/10.1016/j.saa.2014.11.099
- T. Aree, Y.P. Hong and J.-H. Choi, J. Mol. Struct., 1163, 86 (2018); https://doi.org/10.1016/j.molstruc.2018.02.102
- D. Moon and J.-H. Choi, Inorg. Chim. Acta, 519, 120259 (2021); https://doi.org/10.1016/j.ica.2021.120259
- J.-H. Choi, Chem. Phys., 256, 29 (2000); https://doi.org/10.1016/S0301-0104(00)00097-5
- J.-H. Choi, Spectrochim. Acta A Mol. Biomol. Spectrosc., 56, 1653 (2000); https://doi.org/10.1016/S1386-1425(00)00221-3
- J.-H. Choi, I.G. Oh, T. Suzuki and S. Kaizaki, J. Mol. Struct., 694, 39 (2004); https://doi.org/10.1016/j.molstruc.2004.01.034
- J.-H. Choi, Inorg. Chim. Acta, 362, 4231 (2009); https://doi.org/10.1016/j.ica.2009.05.024
- D. Moon, M. Mazúr, M. Valko and J.-H. Choi, J. Mol. Struct., 1221, 128711 (2020); https://doi.org/10.1016/j.molstruc.2020.128711
- D. Moon and J.-H. Choi, J. Coord. Chem., 74, 969 (2021); https://doi.org/10.1080/00958972.2020.1863381
- S. Said, N. Mhadhbi, F. Hajlaoui, T. Bataille and H. Naïli, Acta Crystallogr. Sect. E, 69, o1278 (2013); https://doi.org/10.1107/S1600536813018953
- M. Pojarová, K. Fejfarová and B. El Bali, Acta Crystallogr. Sect. E, 66, m1103 (2013); https://doi.org/10.1107/S1600536810031958
- D. Moon and J.-H. Choi, Acta Crystallogr. Sect. E, 76, 523 (2020); https://doi.org/10.1107/S2056989020003059
- D. Moon and J.-H. Choi, Acta Crystallogr. Sect. E, 73, 755 (2017); https://doi.org/10.1107/S2056989017005771
- D. Moon and J.-H. Choi, Acta Crystallogr. Sect. E, 76, 324 (2020); https://doi.org/10.1107/S2056989020001322
- J.J. McKinnon, D. Jayatilaka and M.A. Spackman, Chem. Commun., 3814 (2007); https://doi.org/10.1039/b704980c
- M.A. Spackman and J.J. McKinnon, CrystEngComm, 4, 378 (2002); https://doi.org/10.1039/B203191B
- M.J. Turner, J.J. McKinnon, S.K. Wolff, D.J. Grimwood, P.R. Spackman, D. Jayatilaka and M.A. Spackman, CrystalExplorer17, University of Western Australia (2017).
- M.A. Spackman and D. Jayatilaka, CrystEngComm, 11, 19 (2009); https://doi.org/10.1039/B818330A
- D. Moon, S. Tanaka, T. Akitsu and J.-H. Choi, J. Mol. Struct., 1154, 338 (2018); https://doi.org/10.1016/j.molstruc.2017.10.066
- J. Moncol, M. Mazúr, M. Valko and J.-H. Choi, Acta Crystallogr. Sect. C, 75, 616 (2019); https://doi.org/10.1107/S2053229619005588
- D. Moon, J. Jeon and J.-H. Choi, J. Coord. Chem., 73, 2029 (2020); https://doi.org/10.1080/00958972.2020.1799199
- D. Moon, S. Jeon, M. Mazúr, M. Valko and J.-H. Choi, J. Mol. Struct., 1231, 129897 (2021); https://doi.org/10.1016/j.molstruc.2021.129897
References
G.C. Valks, G. McRobbie, E.A. Lewis, T.J. Hubin, T.M. Hunter, P.J. Sadler, C. Pannecouque, E. De Clercq and S.J. Archibald, J. Med. Chem., 49, 6162 (2006); https://doi.org/10.1021/jm0607810
L. Ronconi and P.J. Sadler, Coord. Chem. Rev., 251, 1633 (2007); https://doi.org/10.1016/j.ccr.2006.11.017
A. Ross, J.-H. Choi, T.M. Hunter, C. Pannecouque, S.A. Moggach, S. Parsons, E. De Clercq and P.J. Sadler, Dalton Trans., 41, 6408 (2012); https://doi.org/10.1039/c2dt30140g
E. De Clercq, J. Med. Chem., 53, 1438 (2010); https://doi.org/10.1021/jm900932g
J.-H. Choi, M.A. Subhan, K.S. Ryoo and S.W. Ng, Acta Crystallogr. Sect. E, 68, o102 (2012); https://doi.org/10.1107/S160053681105272X
D. Moon, S. Jeon, K.S. Ryoo and J.-H. Choi, Asian J. Chem., 32, 697 (2020); https://doi.org/10.14233/ajchem.2020.22506
F. White, P.J. Sadler and M. Melchart, CSD Communication CCDC 1408165 (2015).
J. Kim, S. Han, I.-K. Cho, K.Y. Choi, M. Heu, S. Yoon and B.J. Suh, Polyhedron, 23, 1333 (2004); https://doi.org/10.1016/j.poly.2004.02.026
D. Moon, S. Jeon and J.-H. Choi, J. Mol. Struct., 1232, 130011 (2021); https://doi.org/10.1016/j.molstruc.2021.130011
D. Moon and J.-H. Choi, Acta Crystallogr. Sect E, 74, 1039 (2018); https://doi.org/10.1107/S2056989018009337
S.G. Kang, J.K. Kweon and S.K. Jung, Bull. Korean Chem. Soc., 12, 483 (1991).
S. Jeon, J. Moncol, M. Mazúr, M. Valko and J.-H. Choi, Crystals, 9, 336 (2019); https://doi.org/10.3390/cryst9070336
G.M. Sheldrick, Acta Crystallogr. Sect. A, 71, 3 (2015); https://doi.org/10.1107/S2053273314026370
G.M. Sheldrick, Acta Crystallogr. Sect. C, 71, 3 (2015); https://doi.org/10.1107/S2053229614024218
J. Koziskova, F. Hahn, J. Richter and J. Kozisek, Acta Chim. Slov., 9, 136 (2016); https://doi.org/10.1515/acs-2016-0023
K. Brandenburg and H. Putz, DIAMOND-3, University of Bonn, Bonn, Germany (2014).
J.-H. Choi, W. Clegg, G.S. Nichol, S.H. Lee, Y.C. Park and M.H. Habibi, Spectrochim. Acta A Mol. Biomol. Spectrosc., 68, 796 (2007); https://doi.org/10.1016/j.saa.2007.01.002
J.-H. Choi and S.H. Lee, J. Mol. Struct., 932, 84 (2009); https://doi.org/10.1016/j.molstruc.2009.05.048
D. Moon and J.-H. Choi, Spectrochim. Acta A Mol. Biomol. Spectrosc., 138, 774 (2015); https://doi.org/10.1016/j.saa.2014.11.099
T. Aree, Y.P. Hong and J.-H. Choi, J. Mol. Struct., 1163, 86 (2018); https://doi.org/10.1016/j.molstruc.2018.02.102
D. Moon and J.-H. Choi, Inorg. Chim. Acta, 519, 120259 (2021); https://doi.org/10.1016/j.ica.2021.120259
J.-H. Choi, Chem. Phys., 256, 29 (2000); https://doi.org/10.1016/S0301-0104(00)00097-5
J.-H. Choi, Spectrochim. Acta A Mol. Biomol. Spectrosc., 56, 1653 (2000); https://doi.org/10.1016/S1386-1425(00)00221-3
J.-H. Choi, I.G. Oh, T. Suzuki and S. Kaizaki, J. Mol. Struct., 694, 39 (2004); https://doi.org/10.1016/j.molstruc.2004.01.034
J.-H. Choi, Inorg. Chim. Acta, 362, 4231 (2009); https://doi.org/10.1016/j.ica.2009.05.024
D. Moon, M. Mazúr, M. Valko and J.-H. Choi, J. Mol. Struct., 1221, 128711 (2020); https://doi.org/10.1016/j.molstruc.2020.128711
D. Moon and J.-H. Choi, J. Coord. Chem., 74, 969 (2021); https://doi.org/10.1080/00958972.2020.1863381
S. Said, N. Mhadhbi, F. Hajlaoui, T. Bataille and H. Naïli, Acta Crystallogr. Sect. E, 69, o1278 (2013); https://doi.org/10.1107/S1600536813018953
M. Pojarová, K. Fejfarová and B. El Bali, Acta Crystallogr. Sect. E, 66, m1103 (2013); https://doi.org/10.1107/S1600536810031958
D. Moon and J.-H. Choi, Acta Crystallogr. Sect. E, 76, 523 (2020); https://doi.org/10.1107/S2056989020003059
D. Moon and J.-H. Choi, Acta Crystallogr. Sect. E, 73, 755 (2017); https://doi.org/10.1107/S2056989017005771
D. Moon and J.-H. Choi, Acta Crystallogr. Sect. E, 76, 324 (2020); https://doi.org/10.1107/S2056989020001322
J.J. McKinnon, D. Jayatilaka and M.A. Spackman, Chem. Commun., 3814 (2007); https://doi.org/10.1039/b704980c
M.A. Spackman and J.J. McKinnon, CrystEngComm, 4, 378 (2002); https://doi.org/10.1039/B203191B
M.J. Turner, J.J. McKinnon, S.K. Wolff, D.J. Grimwood, P.R. Spackman, D. Jayatilaka and M.A. Spackman, CrystalExplorer17, University of Western Australia (2017).
M.A. Spackman and D. Jayatilaka, CrystEngComm, 11, 19 (2009); https://doi.org/10.1039/B818330A
D. Moon, S. Tanaka, T. Akitsu and J.-H. Choi, J. Mol. Struct., 1154, 338 (2018); https://doi.org/10.1016/j.molstruc.2017.10.066
J. Moncol, M. Mazúr, M. Valko and J.-H. Choi, Acta Crystallogr. Sect. C, 75, 616 (2019); https://doi.org/10.1107/S2053229619005588
D. Moon, J. Jeon and J.-H. Choi, J. Coord. Chem., 73, 2029 (2020); https://doi.org/10.1080/00958972.2020.1799199
D. Moon, S. Jeon, M. Mazúr, M. Valko and J.-H. Choi, J. Mol. Struct., 1231, 129897 (2021); https://doi.org/10.1016/j.molstruc.2021.129897