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Theoretical Studies of Reaction Mechanism of 1,3-Indandione with (Z)-N-Methyl-C-Phenylnitrone by Metadynamic Approach
Corresponding Author(s) : Jamal Lasri
Asian Journal of Chemistry,
Vol. 26 No. 22 (2014): Vol 26 Issue 22
Abstract
DFT-based computational study of the reaction mechanism of the acyclic nitrone (Z)-N-methyl-C-phenylnitrone (1) with 1,3-indandione (2) by using the metadynamic method within the CPMD package was investigated. Two theoretical simulations have been performed to study this reaction. The first one corresponds to the formation of the alkylhydroxylamine intermediate, while the second one concerns the C-N bond cleavage which leads to the elimination of N-methylhydroxylamine and formation of 2-benzylidene-2H-indene-1,3-dione (2'). The gas phase calculations predicted that the reaction is slightly endothermic (+2.71 kcal/mol). The computed energy profile also indicated that the ketone-enol tautomerization in this reaction determines the height of the free energy barrier which is about 30 kcal/mol.
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- S. Nakatsu, T. Gubaidullin, V.A. Mamedov and S. Tsuboi, Tetrahedron, 60, 2337 (2004); doi:10.1016/j.tet.2004.01.022. (and references cited therein).
- E. Knoevenagel, Berichte, 31, 2596 (1898).
- J.E. McMurry, Chem. Rev., 89, 1513 (1989); doi:10.1021/cr00097a007.
- G. Wittig and U. Schöllkopf, Chem. Ber., 87, 1318 (1954); doi:10.1002/cber.19540870919.
- A. Spinella, T. Fortunati and A. Soriente, Synlett, 93 (1997); doi:10.1055/s-1997-689.
- R.H. Grubbs, Handbook of Metathesis, Wiley-VCH: Weinheim, Germany (2003).
- G. Jones, Org. React., 15, 204 (1967).
- W. Lehnert, Tetrahedron, 30, 301 (1974); doi:10.1016/S0040-4020(01)91461-9.
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- J. Lasri, M.A.J. Charmier, M. Haukka and A.J.L. Pombeiro, J. Org. Chem., 72, 750 (2007); doi:10.1021/jo061659b.
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- B. Ensing, A. Laio, M. Parrinello and M.L. Klein, J. Phys. Chem. B, 109, 6676 (2005); doi:10.1021/jp045571i.
- A. Laio and M. Parrinello, Proc. Natl. Acad. Sci. USA, 99, 12562 (2002); doi:10.1073/pnas.202427399.
- A. Laio, A. Rodriguez-Fortea, F.L. Gervasio, M. Ceccarelli and M. Parrinello, Phys. Chem. B, 109, 6714 (2005); doi:10.1021/jp045424k.
- S. Nose and M. Klein, Mol. Phys., 50, 1055 (1983); doi:10.1080/00268978300102851.
- D. Vanderbilt, Phys. Rev. B, 41, 7892 (1990); doi:10.1103/PhysRevB.41.7892.
- J. Perdew, K. Burke and M. Ernzerhof, Phys. Rev. Lett., 77, 3865 (1996); doi:10.1103/PhysRevLett.77.3865.
- R. Car and M. Parrinello, Phys. Rev. Lett., 55, 2471 (1985); doi:10.1103/PhysRevLett.55.2471.
- CPMD, http://www.cpmd.org/, Copyright IBM Corp 1990-2008; Copyright Max-Planck-Institut für Festkörperforschung, Stuttgart 1997-2001.
- D.E. Hibbs, J.R. Hanrahan, M.B. Hursthouse, D.W. Knight, J. Overgaard, P. Turner, R.O. Piltz and M.P. Waller, Org. Biomol. Chem., 1, 1034 (2003); doi:10.1039/b210698a.
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References
S. Nakatsu, T. Gubaidullin, V.A. Mamedov and S. Tsuboi, Tetrahedron, 60, 2337 (2004); doi:10.1016/j.tet.2004.01.022. (and references cited therein).
E. Knoevenagel, Berichte, 31, 2596 (1898).
J.E. McMurry, Chem. Rev., 89, 1513 (1989); doi:10.1021/cr00097a007.
G. Wittig and U. Schöllkopf, Chem. Ber., 87, 1318 (1954); doi:10.1002/cber.19540870919.
A. Spinella, T. Fortunati and A. Soriente, Synlett, 93 (1997); doi:10.1055/s-1997-689.
R.H. Grubbs, Handbook of Metathesis, Wiley-VCH: Weinheim, Germany (2003).
G. Jones, Org. React., 15, 204 (1967).
W. Lehnert, Tetrahedron, 30, 301 (1974); doi:10.1016/S0040-4020(01)91461-9.
P.S. Rao and R.V. Venkataratnam, Tetrahedron Lett., 32, 5821 (1991); doi:10.1016/S0040-4039(00)93564-0.
G. Bartoli, R. Beleggia, S. Giuli, A. Giuliani, E. Marcantoni, M. Massaccesi and M. Paoletti, Tetrahedron Lett., 47, 6501 (2006); doi:10.1016/j.tetlet.2006.07.031.
S. Kantevari, R. Bantu and L. Nagarapu, J. Mol. Catal. Chem., 269, 53 (2007); doi:10.1016/j.molcata.2006.12.039.
D.B. Ramachary and C.F. Barbas III, Chem. Eur. J., 10, 5323 (2004); doi:10.1002/chem.200400597.
R. Maggi, F. Bigi, S. Carloni, A. Mazzacani and G. Sartori, Green Chem., 3, 173 (2001); doi:10.1039/b101822c.
G. Bartoli, M. Bosco, A. Carlone, R. Dalpozzo, P. Galzerano, P. Melchiorre and L. Sambri, Tetrahedron Lett., 49, 2555 (2008); doi:10.1016/j.tetlet.2008.02.093.
P. Goswami and B. Das, Tetrahedron Lett., 50, 897 (2009); doi:10.1016/j.tetlet.2008.12.036.
J. Lasri, M.A.J. Charmier, M. Haukka and A.J.L. Pombeiro, J. Org. Chem., 72, 750 (2007); doi:10.1021/jo061659b.
J. Lasri, G. Gajewski, M.F.C. Guedes da Silva, M.L. Kuznetsov, R.R. Fernandes and A.J.L. Pombeiro, Tetrahedron, 68, 7019 (2012); doi:10.1016/j.tet.2012.06.086.
B. Ensing, A. Laio, M. Parrinello and M.L. Klein, J. Phys. Chem. B, 109, 6676 (2005); doi:10.1021/jp045571i.
A. Laio and M. Parrinello, Proc. Natl. Acad. Sci. USA, 99, 12562 (2002); doi:10.1073/pnas.202427399.
A. Laio, A. Rodriguez-Fortea, F.L. Gervasio, M. Ceccarelli and M. Parrinello, Phys. Chem. B, 109, 6714 (2005); doi:10.1021/jp045424k.
S. Nose and M. Klein, Mol. Phys., 50, 1055 (1983); doi:10.1080/00268978300102851.
D. Vanderbilt, Phys. Rev. B, 41, 7892 (1990); doi:10.1103/PhysRevB.41.7892.
J. Perdew, K. Burke and M. Ernzerhof, Phys. Rev. Lett., 77, 3865 (1996); doi:10.1103/PhysRevLett.77.3865.
R. Car and M. Parrinello, Phys. Rev. Lett., 55, 2471 (1985); doi:10.1103/PhysRevLett.55.2471.
CPMD, http://www.cpmd.org/, Copyright IBM Corp 1990-2008; Copyright Max-Planck-Institut für Festkörperforschung, Stuttgart 1997-2001.
D.E. Hibbs, J.R. Hanrahan, M.B. Hursthouse, D.W. Knight, J. Overgaard, P. Turner, R.O. Piltz and M.P. Waller, Org. Biomol. Chem., 1, 1034 (2003); doi:10.1039/b210698a.
M. Lombardo and C. Trombini, Synthesis, 759 (2000); doi:10.1055/s-2000-6269.